PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676710624
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bHLH
Protein Properties Length: 518aa    MW: 58234.8 Da    PI: 9.0349
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676710624genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87.2e-12343388555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                h + Er+RR+++N++f+ Lr+llP+      +K +Ka+iL+ A e + sLq
  676710624 343 HMISERKRREKLNESFQALRSLLPPG-----TKKDKASILTIAREQLISLQ 388
                8899********************97.....8***********99887777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-15332402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.735338387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.77E-11340392No hitNo description
Gene3DG3DSA:4.10.280.102.0E-13342406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-9343388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-13344393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MDAIFLTDDP NTRKQFIGSL AQSFGCVYVC LCYLTSLDGY YNEASQEPST STGSLVRRLF  60
HEYRQSVIPL RNGHVPSTAF MNNLPYLEIR AQDIQRFAYN DEQRLFYQAL IFMSCRSGEI  120
ELGLTYDASN MKIEASLREW FPEDFSRKSS PANSDYLRPP LLPSSSSSSH RSLDSPQNVS  180
EYSSLLFPLI PKPSTTTDAV NDPLHPLLPP VPSATTSNMI HQQQHESFFR NREREEEAMT  240
QAILAVLSAS SSPPSTSSSP LRKGRATAFK RYYCMISGGT GSGRAPPPSV RKQSMMKRAI  300
SFYNRLNIQR RERFAREMAT TGGGDGSGGS GGGRAPTATQ LHHMISERKR REKLNESFQA  360
LRSLLPPGTK KDKASILTIA REQLISLQGE ISKLVERNRE LEAKLAGERE MENDLQPDER  420
FNIRIRHIPE STSRQRVLDL GVVQRGKNIR VDDLMIRLLE FLKHINNVSL VSIDARTRAS  480
EDGDTSVVIV SLRLKVEGEW DESAFQEAVR RVVADLAH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1346351ERKRRE
2347352RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013619569.10.0PREDICTED: putative transcription factor bHLH041
RefseqXP_013673259.10.0PREDICTED: putative transcription factor bHLH041
SwissprotQ9LTS40.0BH041_ARATH; Putative transcription factor bHLH041
TrEMBLA0A078G7U10.0A0A078G7U1_BRANA; BnaA02g08430D protein
STRINGAT5G56960.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM70602840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.10.0bHLH family protein